How to acquire a 1D spectrum on the DPX300:
Commands shown in bold are typed at the command prompt followed by return. Commands in brackets [command] are accessed from the left menu, the sequence [command1]->[command2] refers to the top pulldown menu.
Indented paragraphs in italic cover additional commands and options which are not necessary for the standard procedure.
1) Sample setup:
Sign your name in the logbook.
Measure sample height in gauge, make sure it is at 18mm.
ej to remove standard, insert your sample.
ij to lower your sample into magnet.
type lock, select your solvent from the list and wait until lock signal is in the upper third of the screen. If lock is not found or lock signal is very noisy, type rsh last to read in the latest shim file and type lock again.
Select [Window]->[BSMS Panel] from the top menu (or type bsmsdisp).
In the BSMS window, Select [Shim]
Shim in the order z, z2,z, z3, z. Select the desired shim by clicking on the icon, which will be displayed in yellow. Click with the mouse to the left of the switch at the bottom in order to decrease, to the right to increase the shim current. Adjust such that you achieve a maximum lock signal. If the lock signal moves outside the upper end of the screen select lock gain and decrease the value until the lock signal is back on the screen.
When finished with shimming, exit the BSMS window by selecting [Display]->[Exit] from the BSMS main window.
For automatic shimming, use the command quickshim for a quick, 1-2 min shimming, or longshim for a more thorough adjustment (will take at least 5 minutes).
2) Acquisition setup
Type new. Define name (name) and experiment number (expno). You can chose any experiment number, but the data set name should start with your initials, i. e. hfmycompound for user Holger Försterling. Exit the window with save to keep the settings.
Type rpar experiment all to read the parameter file for your experiment. For example, to do a standard proton, you type rpar h1.hf all.
For a listing of all parameter sets defined by me type rpar *.hf, for a list of all parameter sets type just rpar without argument.
Currently, some important experiments available are:
h1.hf 1D standard Proton, 16 scans
c13.hf 1D standard C-13, 1024 scans
c13dept135.hf 1D C-13 DEPT-135, CH and CH3 up, CH2 down.
cosy.hf 2D 1H/1H COSY, 1 scan, ~5 min.
hsqc.hf 2D 1H/13C correlation (HSQC) (30 min.)
hsqc_ed.hf 2D 1H/13C correlation with editing: CH,CH3 positive, CH2 negative
hmbc.hf 2D 1H/13C multiple (2-3) bond correlation
noesy.hf 2D 1H/1H NOESY
noe1d.hf 1D 1H/1H NOE
An complete updated listing can be found next to the spectrometer.
Important parameters :
sw spectral width in ppm
o1p center of your acquisition window in ppm
ns number of accumulations
d1 relaxation delay
Single experiment:
type rga to adjust the receiver gain
You can check the receiver gain by typing rg, for proton spectra the value should be normally below 1000.
start the experiment by typing zg.
Multiple experiments (same sample):
Other useful acquisition commands :
expt calculates the time required for the experiment
tr saves the current acquisition while the experiment is still in progress. It allows you to process (see below) and preview a spectrum while continuing to acquire data.
halt halt the current acquisition prior to finishing and save the fid.
go Append to an existing experiment.
acqu or [Acquire]->[observe fid window] from the top menu switch to the acquisition display window to display the fid.
3) Processing:
Type ef to perform exponential multiplication and fourier transform.
lb allows to adjust your line broadening, a larger lb yields a better signal to noise at the expense of resolution. Standard values are 0.3 for proton and 1 for carbon.
apk performs an automatic phase correction.
You can du a manual phase correction by selecting [Phase] from the left menu
abs performs an automatic baseline correction.
[integrate] (left menu) enters the integration routine. Use the left mouse button to get an arrow on the spectrum. Use the middle mouse button to define your integration limits.
To calibrate an integral, move the integration arrow onto the desired integral and click the left mouse button while under that integral. The integral is now marked with an asterix. Select [calib] from the left menu and type the value for that integral.
Finally use the left mouse button to get back to the normal cursor. Exit to the main menu by hitting [return] and selecting [save intrng and return].
[DP1] Define plot region. You will be prompted the left and right plot limit in ppm. The default is the region displayed on the screen
setti set plot title. This command calls up a text editor.
cy set y-scaling for highest peak in spectrum. Default 12 cm. You can also set it interactively from the [Utilities] menu (left menu, option [cy])
mi adjust minimum threshold for peak picking (in cm) if necessary You can also set it interactively from the [Utilities] menu (left menu, option [mi])
view gives a preview of the plot
plot send the plot to the printer.
4) Finishing:
ej eject your sample, insert standard
ij to lower down standard
finish automatically executes the following commands:
rsh last read standard shim file
lock cdcl3 lock on standard
re standard 1 read in default data set. This will protect you from your data to be overwritten by the next user.
Finish your log book entry.